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Data mining, forecasting and bioinformatics competitions on Kaggle
http://www.kaggle.com/
thebird.nl
http://thebird.nl/
Pjotr is a scientist/biologist/open source programmer,
BioTeam
http://bioteam.net/
BioTeam is a high-performance consulting practice. We are dedicated to delivering objective, technology agnostic solutions to the life science researchers. We leverage the right technologies customized to our client’s unique needs in order to enable them to reach their scientific objectives.
ANNOVAR website
http://www.openbioinformatics.org/annovar/annovar_db.html
Preparation of local annotation databases
biotoolbox – Tools for querying and analysis of genomic data
http://code.google.com/p/biotoolbox/
NCBI HomePage
http://www.ncbi.nlm.nih.gov/
Calling SNPs with Samtools
http://ged.msu.edu/angus/tutorials-2011/snp_tutorial.html
Cytoscape: An Open Source Platform for Complex Network Analysis and Visualizatio…
http://www.cytoscape.org/
ROCR: Classifier Visualization in R
http://rocr.bioinf.mpi-sb.mpg.de/
OpenWetWare
http://openwetware.org/wiki/Main_Page
OpenWetWare is an effort to promote the sharing of information, know-how, and wisdom among researchers and groups who are working in biology & biological engineering.
Circos
http://circos.ca/
DNA seen through the eyes of a coder
http://ds9a.nl/amazing-dna/
Ensembl
http://www.ensembl.org/index.html
The Ensembl project produces genome databases for vertebrates and other eukaryotic species, and makes this information freely available online.
DNAnexus
https://dnanexus.com/
Powering the genomics revolution
Integrated system of aging biomarkers
http://www.sens.org/node/2223
Monte Carlo Method
http://en.wikipedia.org/wiki/Monte_Carlo_Method
The PubChem Project
http://pubchem.ncbi.nlm.nih.gov/
RCSB Protein Data Bank
http://www.rcsb.org/pdb/home/home.do
Welcome to BioConductor — bioconductor.org
http://www.bioconductor.org/
GoPubMed
http://www.gopubmed.org/
KEGG: Kyoto Encyclopedia of Genes and Genomes
http://www.genome.jp/kegg/
Entrez cross-database search
http://www.ncbi.nlm.nih.gov/sites/gquery
European Bioinformatics Institute
http://www.ebi.ac.uk/
UCSC Genome Browser Home
http://genome.ucsc.edu/
Uri Alon’s Molecular Cell Biology Lab
http://www.weizmann.ac.il/mcb/UriAlon/
the Gene Ontology
http://www.geneontology.org/
B.A.B.A
http://baba.sourceforge.net/
BABA is an applet that tries to explains how some basic algorithms of bioinformatics work.
Human Genome Project Information
http://www.ornl.gov/sci/techresources/Human_Genome/home.shtml
Main Page – partsregistry.org
http://partsregistry.org/Main_Page
Collection of genetic parts that can be mixed and matched to build synthetic biology devices and systems.
Python course in Bioinformatics
http://www.pasteur.fr/recherche/unites/sis/formation/python/
BiologicalNetworks
http://biologicalnetworks.net/index.php
Vadlo
http://www.vadlo.com/
Life Sciences Search Engine
What is Quirrel?
http://whatisquirrel.com/index.html
Quirrel is a purely declarative query language designed for performing analytics and statistics on large-scale, multi-structured data sets.
Bioinformatica
http://www.bioinformatica.info/
My Links
http://delicious.com/ajlopez/bioinformatics